Insertion junction: CLIP2.003122_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.003122
Chromosome:chromosome 6
Location:114921
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g249750 (1 of 1) PF07382//PF13374 - Histone H1-like nucleoprotein HC2 (HC2) // Tetratricopeptide repeat (TPR_10) outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCATGGGCAAATGACTTCGCGGAGCCGGCAGCAATTACGGTCTTTATACT
Internal bar code:ACCGGAATATCCATTTCTTACC

Confirmation - LEAP-Seq

LEAP-Seq distance:2308
LEAP-Seq percent confirming:96.2963
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCCGGTTGAAGTGACAAC
Suggested primer 2:TGTAAAACCGTTTGCGCTGG