Insertion junction: CLIP2.003157_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.003157
Chromosome:chromosome 7
Location:4617226
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g344350 TPP1 Chloroplast thylakoid processing peptidase; (1 of 1) K03100 - signal peptidase I (lepB) outside_mRNA
Cre07.g344400 (1 of 3) 1.1.1.95 - Phosphoglycerate dehydrogenase / Phosphoglyceric acid dehydrogenase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTCTCATGCTGAGAATGTTTGTGCACAATTGAAGTCATCGCCGGTACAA
Internal bar code:CATGGATTAATAAATGCGTCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:3079
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:AAACTCCACACGGCAAATGC
Suggested primer 2:CTGCCCAAGGAGAACATCGT