Gene: Cre07.g344400
Overview
| Common name: | |
| Defline: | (1 of 3) 1.1.1.95 - Phosphoglycerate dehydrogenase / Phosphoglyceric acid dehydrogenase |
| Description: | |
| Synonyms: | Cre07.g344400.t1.1,g8014.t1 |
| Chromosome: | chromosome 7 |
Protein Localization
A plasmid for expressing Cre07.g344400 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre07.g344400-Venus-3xFLAG
Imaged strain: CSI_LW06F1
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
chloroplast/homogeneous/pyrenoid depleted
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
| Bait ID | Bait Name | Prey ID | Prey Name | Reference |
|---|---|---|---|---|
| Cre06.g278195 | CTI,CTI1 | Cre07.g344400 | Wang et al. 2023 | |
| Cre06.g295350 | Cre07.g344400 | Wang et al. 2023 | ||
| Cre07.g344550 | Cre07.g344400 | Wang et al. 2023 |
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.003157_1 | CLIP2.003157 | 5'UTR | 80 | 6.1 |
| CLIP2.003157_2 | CLIP2.003157 | 5'UTR | 80 | 6.1 |
| CLIP2.004437_1 | CLIP2.004437 | CDS | 80 | 6.1 |
| CLIP2.004437_2 | CLIP2.004437 | CDS | 80 | 6.1 |
| CLIP2.004707_1 | CLIP2.004707 | 3'UTR | 80 | 6.1 |
| CLIP2.005230_1 | CLIP2.005230 | 5'UTR | 80 | 6.1 |
| CLIP2.005356_1 | CLIP2.005356 | 3'UTR | 80 | 6.1 |
| CLIP2.005575_1 | CLIP2.005575 | 3'UTR | 80 | 6.1 |
| CLIP2.005904_1 | CLIP2.005904 | 3'UTR | 40 | 6.1 |
| LMJ.RY0402.242850_1 | LMJ.RY0402.242850 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.242850_2 | LMJ.RY0402.242850 | 3'UTR | 95 | 5.5 |
Gene Annotations
| PFAM: | PF00389, PF03446 |
| PANTHER: | PTHR10996 PTHR10996:SF121 |
| KEGG_ec: | EC:1.1.1.95 |
| KEGG_orthology: | K00058 |
| KOG: | KOG0068 |
| Gene ontology terms:: | GO:0004616, GO:0008152, GO:0016616, GO:0051287, GO:0055114 |
| Best arabidopsis TAIR name: | AT1G17745.1 |
| Best arabidopsis TAIR symbol: | PGDH |
| Best arabidopsis TAIR defline: | D-3-phosphoglycerate dehydrogenase |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.