Insertion junction: CLIP2.005356_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.005356
Chromosome:chromosome 7
Location:4621483
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g344400 (1 of 3) 1.1.1.95 - Phosphoglycerate dehydrogenase / Phosphoglyceric acid dehydrogenase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAACCAACCCCGAATTCCACGCAACATGGCTCTCCTGGCCCGGAGAGCC
Internal bar code:CAGTTTCAACTATACCAACGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2538
LEAP-Seq percent confirming:93.2203
LEAP-Seq n confirming:55
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:59

Suggested primers for confirmation by PCR

Suggested primer 1:TTCGGGTTCCTGAAGAGTGC
Suggested primer 2:CTGGCGTGAAGTTGGAGGAT