Insertion junction: CLIP2.004437_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.004437
Chromosome:chromosome 7
Location:4620118
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g344400 (1 of 3) 1.1.1.95 - Phosphoglycerate dehydrogenase / Phosphoglyceric acid dehydrogenase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGATGTTCTGCGTGCCCAGGAAGGTGGTGATCTGGCCCAGCACACCCGCC
Internal bar code:GGTTCCACACAACAGAGGTTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1432
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGAGTTGACAGCCACGAA
Suggested primer 2:GCACTCTTCAGGAACCCGAA