Insertion junction: CLIP2.003159_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.003159
Chromosome:chromosome 6
Location:2849066
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g272200 (1 of 3) PF08238 - Sel1 repeat (Sel1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGAATCAGCCAGCGCCAGCCCTCTGCCACGCACACCCACGCGGCCGCGC
Internal bar code:AATACGGGGTAACGATGCACAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2081
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGCCGTGTAATGCATCTG
Suggested primer 2:GCCATCGACAACGTATGCAC