Insertion junction: CLIP2.003162_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.003162
Chromosome:chromosome 3
Location:4503299
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g175850 EEP1 (1 of 1) K10771 - AP endonuclease 1 (APEX1); putative exodeoxyribonuclease III intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGGCTTGGACCCTCCCGACTTGCATGCGCAGTCGATGCCCACCGCCAT
Internal bar code:TCTGTATGTATCTCTAAAGCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:605
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:AACGCCTCGTCTTACTGCAA
Suggested primer 2:TTCACGTGACGTTCCGGAAT