Insertion junction: CLIP2.003256_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.003256
Chromosome:chromosome 12
Location:566695
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g493950 PRPS13 Chloroplast ribosomal protein S13; (1 of 1) K02952 - small subunit ribosomal protein S13 (RP-S13, rpsM) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAGCGTGGCTATCAGTCAGCACAGTCGGCCATTCGCTTCGCCGTTGGGG
Internal bar code:TTGGGTGTTTTACCAGTCTGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1279
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:TTTAATGCGGCCTCAGCTCA
Suggested primer 2:GGGCGTGGAGAACAAGAAGA