Gene: Cre12.g493950
Overview
| Common name: | PRPS13 |
| Defline: | Chloroplast ribosomal protein S13; (1 of 1) K02952 - small subunit ribosomal protein S13 (RP-S13, rpsM) |
| Description: | imported to chloroplast; Chloroplast small ribosomal subunit S13 |
| Synonyms: | g12071.t1,Cre12.g493950.t1.1 |
| Chromosome: | chromosome 12 |
Protein Localization
A plasmid for expressing Cre12.g493950 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre12.g493950-Venus-3xFLAG
Imaged strain: CSI_LW01F6
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
chloroplast/not homogeneous/pyrenoid depleted/enriched around pyrenoid
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.003085_1 | CLIP2.003085 | outside_mRNA | 80 | 6.1 |
| CLIP2.003085_2 | CLIP2.003085 | outside_mRNA | 80 | 6.1 |
| CLIP2.003256_1 | CLIP2.003256 | intron | 80 | 6.1 |
| CLIP2.003256_2 | CLIP2.003256 | intron | 80 | 6.1 |
| CLIP2.005714_1 | CLIP2.005714 | outside_mRNA | 80 | 6.1 |
| CLIP2.005714_2 | CLIP2.005714 | outside_mRNA | 80 | 6.1 |
Gene Annotations
| PFAM: | PF00416 |
| PANTHER: | PTHR10871 |
| KEGG_ec: | |
| KEGG_orthology: | K02952 |
| KOG: | KOG3311 |
| Gene ontology terms:: | GO:0003676, GO:0003723, GO:0003735, GO:0005622, GO:0005840, GO:0006412 |
| Best arabidopsis TAIR name: | AT5G14320 |
| Best arabidopsis TAIR symbol: | |
| Best arabidopsis TAIR defline: | Ribosomal protein S13/S18 family |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.