Insertion junction: CLIP2.003347_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.003347
Chromosome:chromosome 12
Location:2145910
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g509650 PDS1,PDS (1 of 1) K02293 - 15-cis-phytoene desaturase (PDS, crtP); phytoene desaturase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCTCGACTGCCCAAATAACAAGGCCTACGCTTCAAGCGTTCCCTGACG
Internal bar code:GTAGCTGACAGAATGGTGACAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1362
LEAP-Seq percent confirming:76.4706
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:ATGACGCTCGTGACTGTTGT
Suggested primer 2:GGCAGGCTCTGAACAGTTCT