Insertion junction: CLIP2.003348_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.003348
Chromosome:chromosome 3
Location:6545457
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g194200 PDH2 Pyruvate dehydrogenase E1 beta subunit; (1 of 1) PTHR11624//PTHR11624:SF76 - DEHYDROGENASE RELATED // PYRUVATE DEHYDROGENASE E1 COMPONENT SUBUNIT BETA-2, CHLOROPLASTIC-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTTAGGGAACATGTTGCAGCAGCCTCGGCGGGGAGCCAATTTTGAGCCC
Internal bar code:AATCCGATGCCCTAACATTTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1258
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:AGATGAGCAGGAGCATGACG
Suggested primer 2:ACGGGGTGGTGAAAGTGATC