Insertion junction: CLIP2.003348_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.003348
Chromosome:chromosome 3
Location:6545457
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g194200 PDH2 Pyruvate dehydrogenase E1 beta subunit; (1 of 1) PTHR11624//PTHR11624:SF76 - DEHYDROGENASE RELATED // PYRUVATE DEHYDROGENASE E1 COMPONENT SUBUNIT BETA-2, CHLOROPLASTIC-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCCACCCCAACACCCCAACATCCAGATCACTGATGTGGGGAGGGGATC
Internal bar code:ACCGTTACACTTGTAGTCTAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1127
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:ACGGGGTGGTGAAAGTGATC
Suggested primer 2:AGATGAGCAGGAGCATGACG