Insertion junction: CLIP2.003421_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.003421
Chromosome:chromosome 12
Location:7610642
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g555951 PYRD1,RFD1 putative riboflavin metabolism-associated deaminase; (1 of 2) 3.5.4.26 - Diaminohydroxyphosphoribosylaminopyrimidine deaminase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGAGGGTAGAGGGCGGGGATCCACGCAGCCTATCAAGTGCATGGGACGGC
Internal bar code:AATGTGCTTTCATAATCTTGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:2526
LEAP-Seq percent confirming:94.8718
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:TGACGCAGCGAGTATGATCC
Suggested primer 2:CCACAGCACAGACCAAAACG