Insertion junction: CLIP2.003434_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.003434
Chromosome:chromosome 3
Location:5591921
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g185550 SEBP1,SBP1 (1 of 2) 3.1.3.37 - Sedoheptulose-bisphosphatase / Sedoheptulose-1,7-bisphosphatase; Sedoheptulose-1%252C7-bisphosphatase, chloroplastic intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTTCGGAGGGGAGGGCGGGTGTGACTGCTGTGGTGCCGCCGCAGGATC
Internal bar code:GAAGGAGGCGGCCAAATACCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:3073
LEAP-Seq percent confirming:82.8571
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:TGGACGTTGATGACAAGCGA
Suggested primer 2:CTGACCCAGGCCAAGGTAAG