Insertion junction: CLIP2.003501_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.003501
Chromosome:chromosome 3
Location:4229065
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g173800 PDXK1,SOS4,PDX2 (1 of 1) 2.7.1.35 - Pyridoxal kinase / Vitamin B6 kinase; Pyridoxal kinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGAAACTGGCTGGCCTCCACTACCACCCCAATAATCTTTATTTGCCTG
Internal bar code:AAAATGGGTGGTGGTCCGGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3994
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCACGTCTCTCACCAACT
Suggested primer 2:AACATATTGCAATCGGGCGC