Insertion junction: CLIP2.003549_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.003549
Chromosome:chromosome 12
Location:1431014
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g488500 ARC6 Accumulation and replication of chloroplast; (1 of 2) PTHR33925//PTHR33925:SF3 - FAMILY NOT NAMED // PROTEIN ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTATGGGGTCCTGTGAGTGTGAGCCGATGGAAGGTATAGATGCTGGGAG
Internal bar code:AAAGCCTCGTGCGGGTCGCTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:6389
LEAP-Seq percent confirming:98.2456
LEAP-Seq n confirming:56
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:ATTGAGGTCGCAAGTGAGGG
Suggested primer 2:GGTTCTGGATCTGGGTCTGC