Insertion junction: CLIP2.003581_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.003581
Chromosome:chromosome 7
Location:1656940
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g325350 KIN4-3,KIN10A,KIN10-1 Kinesin motor protein; (1 of 4) K10395 - kinesin family member 4/21/27 (KIF4_21_27) 3'UTR
Cre07.g325400 LEU3 Isopropylmalate dehydrogenase; (1 of 1) 1.1.1.85 - 3-isopropylmalate dehydrogenase / IMDH 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGCAATCAGCACCCACGCCCGCCCGGGCGCACAGCGCACACGTCGTCC
Internal bar code:GCGTAGTGGGACAGGATTGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:756
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GACTTCGGTGGGGAAGAAGG
Suggested primer 2:CACGGCATTTTGCGCATCTA