Insertion junction: CLIP2.003586_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.003586
Chromosome:chromosome 3
Location:4230650
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g173800 PDXK1,SOS4,PDX2 (1 of 1) 2.7.1.35 - Pyridoxal kinase / Vitamin B6 kinase; Pyridoxal kinase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTATCCGGTCGGCCCCATCTGGCCCCATCCGTTCGGCCCCGGAAAGGCC
Internal bar code:CAGCATCGTAATGCCGTTAATT

Confirmation - LEAP-Seq

LEAP-Seq distance:3027
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:AGCTGAATTCCCTAGTCGCG
Suggested primer 2:TGTTGTGGCGAGATCGAACA