Insertion junction: CLIP2.003586_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.003586
Chromosome:chromosome 3
Location:4230658
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g173800 PDXK1,SOS4,PDX2 (1 of 1) 2.7.1.35 - Pyridoxal kinase / Vitamin B6 kinase; Pyridoxal kinase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAAAGCCTATCTGGCAATCTCTCAAGCTTGAGGCAGCGCAAGCGACACGC
Internal bar code:CAGCATCGTAATGCCGTTAATT

Confirmation - LEAP-Seq

LEAP-Seq distance:1652
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTGTGGCGAGATCGAACA
Suggested primer 2:AGCTGAATTCCCTAGTCGCG