Insertion junction: CLIP2.003687_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.003687
Chromosome:chromosome 9
Location:933331
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g402950 CGL21 Conserved in the Green Lineage 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATTGCGTGCACCGCTGATGTTGGGGTTCTTCACAGGATCTGTGGTTTGT
Internal bar code:TGCTTGAATACGTTGCGGGATG

Confirmation - LEAP-Seq

LEAP-Seq distance:2101
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TCGACTGGTTGTTTCCTCCG
Suggested primer 2:TGTACGAGGCGGAACTTGAC