Insertion junction: CLIP2.003756_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.003756
Chromosome:chromosome 12
Location:1428740
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g488500 ARC6 Accumulation and replication of chloroplast; (1 of 2) PTHR33925//PTHR33925:SF3 - FAMILY NOT NAMED // PROTEIN ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6, CHLOROPLASTIC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGCAGCACGTCAGCACCGACGATGCTGGCACCGACCGCGTTCGCCTGC
Internal bar code:CTTTAGAGATCAGTACAGTAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2023
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:GTCCTGCTGGGTGACTACAC
Suggested primer 2:TTCCCACGAGCTCACTGAAC