Insertion junction: CLIP2.003778_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.003778
Chromosome:chromosome 3
Location:4501179
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g175850 EEP1 (1 of 1) K10771 - AP endonuclease 1 (APEX1); putative exodeoxyribonuclease III CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCGGTAGCTGGGGCGTCTCCGCTGCTTGCGACCAACCACGGCGCAGCT
Internal bar code:TTCCTTTTGAGTTTTGTTTATA

Confirmation - LEAP-Seq

LEAP-Seq distance:1484
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTAAAGCCCCAATTCCCT
Suggested primer 2:GTCTCATTGCGTCGACATGC