Insertion junction: CLIP2.003782_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.003782
Chromosome:chromosome 13
Location:1254539
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g570550 CDD1 Cytidine deaminase; (1 of 1) 3.5.4.5 - Cytidine deaminase / Cytosine nucleoside deaminase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTTGGCGGCGTGCTGCACCGGGGCGTCCGGGCGCTCCGCCAGCACCACC
Internal bar code:TGTACACCTTGTCGCAATGAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1124
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:ACAGCAACAGCAACAGCATG
Suggested primer 2:AAGTGTGAACTCGTCGGTCC