Insertion junction: CLIP2.003782_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.003782
Chromosome:chromosome 13
Location:1254539
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g570550 CDD1 Cytidine deaminase; (1 of 1) 3.5.4.5 - Cytidine deaminase / Cytosine nucleoside deaminase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCGGCTGCTGCTGCAGGCGGTGGCGCCGGCGGCGCGGCTGACGGTGCTG
Internal bar code:CATGGGGTCAGCGCGTTTTCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:5346
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:AAGTGTGAACTCGTCGGTCC
Suggested primer 2:ACAGCAACAGCAACAGCATG