Insertion junction: CLIP2.003783_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.003783
Chromosome:chromosome 5
Location:2350697
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre05.g238332 PSAD,PSAD1 Photosystem I reaction center subunit II, 20 kDa; (1 of 1) K02692 - photosystem I subunit II (psaD) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGATTTCGCTGATTGATACGGGATCGGAGCTCGGAGGCTTTCGCGCTAG
Internal bar code:GTCGGTGTGGTCGCAGCGAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:335
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTCTCCTGGATGGTTCGT
Suggested primer 2:AGGGGGATCTGGGAATTGGA