Insertion junction: CLIP2.003812_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.003812
Chromosome:chromosome 1
Location:4092144
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g027150 CPLD46,HEL5 Conserved in the plant lineage and diatoms; (1 of 2) PTHR24031//PTHR24031:SF249 - RNA HELICASE // ATP-DEPENDENT DNA HELICASE RECG CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTTCCACGTGGACTCCAGCCGCCCGCCGCTCCGGCCCTCCGCCCGCAGC
Internal bar code:AGAGTCTGTGGCATCCGTGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:745
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:AGCTGCGTTTGGTTACGGTA
Suggested primer 2:TGTGTGTGTGTGTGTGTGGA