Insertion junction: CLIP2.003871_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.003871
Chromosome:chromosome 3
Location:1975846
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g155650 CLC1 Clathrin light chain; (1 of 1) PTHR10639 - CLATHRIN LIGHT CHAIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGGGCAAGTTCTCAACACGACGGGACCTGGCCCCCCGCAACCGGCGAC
Internal bar code:TGTCTGGCGTGCGGTCTTTTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2381
LEAP-Seq percent confirming:94.2308
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:AGGAGTAAGGACCCAGCGAT
Suggested primer 2:GATACGCTCCTCACTCACCG