Insertion junction: CLIP2.003888_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.003888
Chromosome:chromosome 12
Location:5539557
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g530650 GLN2 Glutamine synthetase; (1 of 2) PTHR20852//PTHR20852:SF57 - GLUTAMINE SYNTHETASE // GLUTAMINE SYNTHETASE 2 CYTOPLASMIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTGCGACAGGCGCCGTTGTGTTGAGCGAACGCGGTTGGGCAGCACAAT
Internal bar code:GTCGATAGTTAACAATCTGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:724
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:TCGTCAATGATCTCGCGGAG
Suggested primer 2:GAGCGCACAAGCAAAGTGAA