Insertion junction: CLIP2.003892_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.003892
Chromosome:chromosome 7
Location:428856
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g315100 (1 of 2) 1.5.4.1 - Pyrimidodiazepine synthase outside_mRNA
lncRNA_TCONS_00047798 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCGCACGTCCGTGCCGTGTTTCCCGCCACCATCCCCGCGCCCCAGCTGC
Internal bar code:TGATCGAGACTTCCGGATGATG

Confirmation - LEAP-Seq

LEAP-Seq distance:2823
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:GGCAAAAGACACACGTGGAC
Suggested primer 2:TATCCCCACGGTAGCCTCAA