Gene: Cre07.g315100
Overview
| Common name: | |
| Defline: | (1 of 2) 1.5.4.1 - Pyrimidodiazepine synthase |
| Description: | |
| Synonyms: | Cre07.g315100.t1.1,g7290.t1 |
| Chromosome: | chromosome 7 |
Protein Localization
A plasmid for expressing Cre07.g315100 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre07.g315100-Venus-3xFLAG
Imaged strain: CSI_LW09F8
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
chloroplast/not homogeneous/not pyrenoid depleted/enriched around pyrenoid
cytosol/cytosol (strong signal)
shapes in cytoplasm/a few small puncta|vesicles in cytoplasm
nucleus/nucleoplasm
nucleus/nucleolus
(with enriched signal in nucleoplasm)
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.001141_1 | CLIP2.001141 | intron | 80 | 6.1 |
| CLIP2.001769_1 | CLIP2.001769 | intron | 80 | 6.1 |
| CLIP2.001769_2 | CLIP2.001769 | intron | 80 | 6.1 |
| CLIP2.003643_1 | CLIP2.003643 | intron | 80 | 6.1 |
| CLIP2.003643_2 | CLIP2.003643 | intron | 80 | 6.1 |
| CLIP2.003892_1 | CLIP2.003892 | outside_mRNA | 80 | 6.1 |
| CLIP2.003892_2 | CLIP2.003892 | outside_mRNA | 80 | 6.1 |
| CLIP2.005017_1 | CLIP2.005017 | intron | 80 | 6.1 |
| CLIP2.005136_1 | CLIP2.005136 | intron | 80 | 6.1 |
| CLIP2.005530_1 | CLIP2.005530 | outside_mRNA | 80 | 6.1 |
| CLIP2.005530_2 | CLIP2.005530 | outside_mRNA | 80 | 6.1 |
| LMJ.RY0402.075207_1 | LMJ.RY0402.075207 | intron | 58 | 5.5 |
| LMJ.RY0402.075207_2 | LMJ.RY0402.075207 | 5'UTR | 73 | 5.5 |
Gene Annotations
| PFAM: | PF06110 |
| PANTHER: | PTHR12452 |
| KEGG_ec: | EC:1.5.4.1 |
| KEGG_orthology: | |
| KOG: | KOG3425 |
| Gene ontology terms:: | |
| Best arabidopsis TAIR name: | AT5G42850 |
| Best arabidopsis TAIR symbol: | |
| Best arabidopsis TAIR defline: | Thioredoxin superfamily protein |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.