Insertion junction: CLIP2.005530_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.005530
Chromosome:chromosome 7
Location:426628
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g315100 (1 of 2) 1.5.4.1 - Pyrimidodiazepine synthase outside_mRNA
lncRNA_TCONS_00046952 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCACCTCCATGGGACAGGGGTGTTGGTTACATGGCACGCTATGAGGAGG
Internal bar code:TTTAGGTACAGTGATCAACTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1982
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:GCAAGAATCAGCGCGAAGAG
Suggested primer 2:CCAGCACCTCTCTCCTCTCT