Insertion junction: CLIP2.005136_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.005136
Chromosome:chromosome 7
Location:428048
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g315100 (1 of 2) 1.5.4.1 - Pyrimidodiazepine synthase intron
lncRNA_TCONS_00047798 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCGAATGCGTCAGGTAGAGCCTCCAGGACGGCGCCCAACGCTAATATCC
Internal bar code:TCTTTCGTAAAGCGAAGAGCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3476
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:97
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:97

Suggested primers for confirmation by PCR

Suggested primer 1:CGCACTAACGGAACAGGACT
Suggested primer 2:AGAGAGGAGAGAGGTGCTGG