Insertion junction: CLIP2.003892_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.003892
Chromosome:chromosome 7
Location:428858
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g315100 (1 of 2) 1.5.4.1 - Pyrimidodiazepine synthase outside_mRNA
lncRNA_TCONS_00047798 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCTAGTGCGGTCCTGGGCCACCGGGCCAACGTGCAGGGTGCGACTGGTC
Internal bar code:GATTACTGGGATAACTATGAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1080
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:TATCCCCACGGTAGCCTCAA
Suggested primer 2:GGCAAAAGACACACGTGGAC