Insertion junction: CLIP2.003930_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.003930
Chromosome:chromosome 10
Location:2258952
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g433950 (1 of 2) PTHR33222:SF3 - PROTEIN CURVATURE THYLAKOID 1C, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGACTGTGCGTTAGGTAGTTCAGGTTGTGACGGCGCCAGGTATTCCTGCT
Internal bar code:GAACTCCGAGTCGCTAGCGATT

Confirmation - LEAP-Seq

LEAP-Seq distance:7385
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:70
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:70

Suggested primers for confirmation by PCR

Suggested primer 1:CAGAATTGCACACGGCCAAA
Suggested primer 2:AGATCCCCATCGTGAGTCCA