Insertion junction: CLIP2.003934_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.003934
Chromosome:chromosome 7
Location:4634315
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g344550 (1 of 3) 1.1.1.95 - Phosphoglycerate dehydrogenase / Phosphoglyceric acid dehydrogenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGACCAGAAGTCTGCTATAACTTGCGATTTGATGCGCGCCATTACTGCGT
Internal bar code:TATATTTATGCTTTCCCATGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2524
LEAP-Seq percent confirming:79.5918
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGGTTTAGTTTGCGTGCA
Suggested primer 2:GAGGCTTGGACATGTGGACA