Insertion junction: CLIP2.004016_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.004016
Chromosome:chromosome 3
Location:3941815
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g171179 (1 of 226) IPR012337 - Ribonuclease H-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCGGCGCGGCCGCCCTCACCGCAGGGCGCCCCCAGCACGCCCTCCGCCC
Internal bar code:TTCCGACGTAGTGGAGTCAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:3371
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCACCTCAGGTTGCTCTG
Suggested primer 2:GAATCGGTGGAGGGTGGTG