Gene: Cre03.g171179
Overview
| Common name: | |
| Defline: | (1 of 226) IPR012337 - Ribonuclease H-like domain |
| Description: | |
| Synonyms: | g3527.t1,Cre03.g171179.t1.1 |
| Chromosome: | chromosome 3 |
Protein Localization
A plasmid for expressing Cre03.g171179 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre03.g171179-Venus-3xFLAG
Imaged strain: CSI_LW06D5
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
chloroplast envelope/not homogeneous/patches
cytosol/cytosol (weak signal)
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.001914_1 | CLIP2.001914 | intron | 80 | 6.1 |
| CLIP2.001914_2 | CLIP2.001914 | intron | 80 | 6.1 |
| CLIP2.003190_1 | CLIP2.003190 | CDS | 80 | 6.1 |
| CLIP2.003190_2 | CLIP2.003190 | CDS | 80 | 6.1 |
| CLIP2.004016_1 | CLIP2.004016 | intron | 80 | 6.1 |
| CLIP2.004016_2 | CLIP2.004016 | intron | 80 | 6.1 |
| CLIP2.004305_1 | CLIP2.004305 | CDS | 80 | 6.1 |
| CLIP2.004305_2 | CLIP2.004305 | CDS | 80 | 6.1 |
| CLIP2.004896_1 | CLIP2.004896 | CDS | 80 | 6.1 |
| CLIP2.004896_2 | CLIP2.004896 | CDS | 80 | 6.1 |
| CLIP2.068458_1 | CLIP2.068458 | 3'UTR | 80 | 6.1 |
| LMJ.RY0402.051107_2 | LMJ.RY0402.051107 | CDS | 58 | 5.5 |
| LMJ.RY0402.142422_1 | LMJ.RY0402.142422 | 5'UTR | 58 | 5.5 |
| LMJ.RY0402.179953_1 | LMJ.RY0402.179953 | 5'UTR_intron | 95 | 5.5 |
| LMJ.RY0402.179953_2 | LMJ.RY0402.179953 | 5'UTR_intron | 95 | 5.5 |
| LMJ.RY0402.194147_1 | LMJ.RY0402.194147 | intron | 58 | 5.5 |
Gene Annotations
| PFAM: | |
| PANTHER: | |
| KEGG_ec: | |
| KEGG_orthology: | |
| KOG: | |
| Gene ontology terms:: | GO:0003676 |
| Best arabidopsis TAIR name: | |
| Best arabidopsis TAIR symbol: | |
| Best arabidopsis TAIR defline: | |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.