Insertion junction: CLIP2.004016_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.004016
Chromosome:chromosome 3
Location:3941816
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g171179 (1 of 226) IPR012337 - Ribonuclease H-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTGTCCGGCACGAGCCGGCGCACGTGCGCACCTGGAGTCCAGCTTGCA
Internal bar code:TATAAGCTGGGCTTGGAACAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:371
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:24
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:GAATCGGTGGAGGGTGGTG
Suggested primer 2:CTCCACCTCAGGTTGCTCTG