Insertion junction: CLIP2.004305_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.004305
Chromosome:chromosome 3
Location:3940486
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g171179 (1 of 226) IPR012337 - Ribonuclease H-like domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGAGGGGGGGCGAGGGGGCGGCCAGGGAGGCGGCAGAGCGGCAGGAGC
Internal bar code:AGATTTCCGCTTGGGAGTAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:881
LEAP-Seq percent confirming:57.1429
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CACCACCCTCCACCGATTC
Suggested primer 2:GCGTGGCATGCAGTAATCTG