Insertion junction: CLIP2.068458_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.068458
Chromosome:chromosome 3
Location:3943375
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g171179 (1 of 226) IPR012337 - Ribonuclease H-like domain 3'UTR
Cre03.g171200 (1 of 3) 3.6.1.5 - Apyrase / ATP-diphosphohydrolase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACATTGCGGCGTTTGGACTTTGCGCGGTAACTGCGAACGACTTGCAAAA
Internal bar code:TCTCTTAGCCCACCATCAAACA

Confirmation - LEAP-Seq

LEAP-Seq distance:1634
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:ACGGCTTGTACTTCCAGGTG
Suggested primer 2:GGTGACCTCAAGGCTCTGAC