Insertion junction: CLIP2.004049_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.004049
Chromosome:chromosome 9
Location:1597678
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g398750 (1 of 55) PTHR23257//PTHR23257:SF394 - SERINE-THREONINE PROTEIN KINASE // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCAACCTCTTTTCCCATCCACAAACACACTCCACTCTCCGTCTTTTGGT
Internal bar code:GTTGACGTGATTGTAATGTACT

Confirmation - LEAP-Seq

LEAP-Seq distance:809
LEAP-Seq percent confirming:77.7778
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TTCGGAGGGAAGTTCAACGG
Suggested primer 2:TAGGGGAGAGAAGGGAAGGC