Insertion junction: CLIP2.004057_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.004057
Chromosome:chromosome 6
Location:6876643
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g296500 (1 of 1) PF01753//PF07719 - MYND finger (zf-MYND) // Tetratricopeptide repeat (TPR_2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTCTCCAGTGCGCGCACACACACACCACACACACACACACACACACAC
Internal bar code:CGAATCATTCTTCTTTTACCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:337
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TCTCTCGCTCACACACACAC
Suggested primer 2:CTCCCACCCTTCACACTCAC