Insertion junction: CLIP2.004069_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.004069
Chromosome:chromosome 3
Location:8361154
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g198950 CGL30 (1 of 3) PTHR31407//PTHR31407:SF18 - FAMILY NOT NAMED // PSBP DOMAIN-CONTAINING PROTEIN 4, CHLOROPLASTIC; Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCACCCCAACCAACGGGGCGCGGCATGCGCTGGGGCAACGGATGTGTG
Internal bar code:CTCCTTTAGGGTTTATCTGCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:3484
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:53
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGGGAGGTGTGCATGATG
Suggested primer 2:TCCCTCCTCCTACCCATGTG