Insertion junction: CLIP2.004069_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.004069
Chromosome:chromosome 3
Location:8361165
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g198950 CGL30 (1 of 3) PTHR31407//PTHR31407:SF18 - FAMILY NOT NAMED // PSBP DOMAIN-CONTAINING PROTEIN 4, CHLOROPLASTIC; Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGCGCCGTCTGCATGCAGCGAACCGGCCTCCACGGGTCTGACGTTCCT
Internal bar code:AGAATAATTACACTGCGGTAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1587
LEAP-Seq percent confirming:96.7742
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:TCCCTCCTCCTACCCATGTG
Suggested primer 2:ACTGGGAGGTGTGCATGATG