Insertion junction: CLIP2.004092_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.004092
Chromosome:chromosome 6
Location:1016442
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g256850 SND1B SAND domain-encoding short ORF; (1 of 68) 2.1.1.43 - Histone-lysine N-methyltransferase / Protein-lysine N-methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGCCATTTCAACTTGTCACTTACCGGCATTTTGTCCACCCGGTTTGGC
Internal bar code:CGTTAACAGTCTGTCCCCGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1688
LEAP-Seq percent confirming:47.2727
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:29
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:TCAACCAACCGAGTGGCTAC
Suggested primer 2:CGACCGCATCAGACAGCTAT