Insertion junction: CLIP2.004100_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.004100
Chromosome:chromosome 16
Location:6783157
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g672300 (1 of 1) PTHR13711//PTHR13711:SF182 - SWI/SNF-RELATED CHROMATIN BINDING PROTEIN // SUBFAMILY NOT NAMED; High mobility group protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCAAGCAGCAGGCGCAGCAGTCCGCGTAAGCATGGGCAGCAAGCATGA
Internal bar code:AGAAACCAGAGATATGGGAAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1576
LEAP-Seq percent confirming:36.3636
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCCAACCAAAACGCACAG
Suggested primer 2:AAACACACCCCTTGCCTTCA