Insertion junction: CLIP2.004136_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.004136
Chromosome:chromosome 2
Location:1539833
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g084500 CGL134 (1 of 102) PF01753 - MYND finger (zf-MYND); possible histone acetyltransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACACTACCGTACCCATACGTTTGACTAACACGCGACCATGCAACCACCA
Internal bar code:CGTTGCGTTATCACATTGCGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:849
LEAP-Seq percent confirming:97.4359
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTGTGGGCCTGGCTAAAA
Suggested primer 2:ACGAAACACGCATTGGTTGG