Insertion junction: CLIP2.004186_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.004186
Chromosome:chromosome 7
Location:2456223
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre07.g329150 SPL21,SPLH1 DEAH-box helicase, possible nuclear pre-mRNA splicing factor, N-terminal; (1 of 3) K12818 - ATP-dependent RNA helicase DHX8/PRP22 (DHX8, PRP22) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATGCATCCGAGCGCTACTGAGCTATACGTGATCATCTTACTGACGTTAC
Internal bar code:TAGTTGCCTAGGTACTGGTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:830
LEAP-Seq percent confirming:50.9434
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:26
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:ATGAAGCCTCGGAACACGTT
Suggested primer 2:CCATTCCTTGACGTCCTGCT