Insertion junction: CLIP2.004269_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.004269
Chromosome:chromosome 2
Location:6427624
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g388372 RAT2,OPR39 tscA RNA stabilization factor CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGGGCCAACGCCGTCAGCTGCAGCTCCCGCGGCGGCATGGACGGCAACA
Internal bar code:TGATGCAGTTATGCAGGGAGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3099
LEAP-Seq percent confirming:98.0
LEAP-Seq n confirming:98
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:100

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTCATGTCGTACTGCCTT
Suggested primer 2:CTGCAAACCACTGCCAGAAC