Insertion junction: CLIP2.004386_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.004386
Chromosome:chromosome 12
Location:3676098
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g513700 HEL52 DEAD box ATP-dependent RNA helicase; (1 of 1) K14808 - ATP-dependent RNA helicase DDX54/DBP10 [EC:3.6.4.13] (DDX54, DBP10) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGGGATTTCGAGTGCAACATCCCTAAGGTTAGTTCGTCTGTCGACCAG
Internal bar code:TTAAAATAGAAAAGAATCCCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:321
LEAP-Seq percent confirming:2.85714
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:34
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:CGGACTCAAGACGGAAGACC
Suggested primer 2:CAAGGAGGTAGTGTTGCGGT